Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_02687Hypothetical protein. (274 aa)    
Predicted Functional Partners:
maoI
Primary amine oxidase precursor.
       0.770
T45_02685
Hypothetical protein.
       0.686
treY
Maltooligosyl trehalose synthase.
       0.669
polC_2
DNA polymerase III PolC-type.
       0.630
sodF1
Superoxide dismutase [Fe-Zn] 1; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.618
rpmA
50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.607
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
   0.607
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
   0.607
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.607
rplQ
50S ribosomal protein L17.
    
   0.607
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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