Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gbpA_1GlcNAc-binding protein A. (326 aa)    
Predicted Functional Partners:
manA_1
Mannan endo-1,4-beta-mannosidase precursor.
 
  
 0.633
chiC
Chitinase C precursor.
 
  
 0.617
chtA
Chitinase 63 precursor; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.605
chiA
Putative bifunctional chitinase/lysozyme.
 
  
 0.587
cbhA
Exoglucanase A precursor; Belongs to the glycosyl hydrolase family 6.
  
   
 0.563
bprV
Extracellular basic protease precursor.
       0.519
celA1
Endoglucanase 1 precursor; Belongs to the glycosyl hydrolase family 6.
  
   
 0.503
celD
Endoglucanase E-4 precursor.
  
     0.493
celB
Endoglucanase E-2 precursor; Belongs to the glycosyl hydrolase family 6.
  
   
 0.463
cbhB
Exoglucanase B precursor.
  
   
 0.447
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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