Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_02742Hypothetical protein. (157 aa)    
Predicted Functional Partners:
murC_1
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.746
ribD2_1
2,5-diamino-6-ribosylamino-4(3H-pyrimidinone.
       0.729
T45_00601
Hypothetical protein.
  
     0.696
T45_02744
AFG1-like ATPase.
 
     0.694
msrB
Peptide methionine sulfoxide reductase MsrB.
       0.690
T45_08640
Hypothetical protein.
  
     0.632
T45_01863
Tetratricopeptide repeat protein.
  
     0.621
T45_01472
2',5' RNA ligase family.
  
     0.616
T45_00870
Hypothetical protein.
  
     0.604
T45_02745
Hypothetical protein.
       0.596
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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