Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dauA_1C4-dicarboxylic acid transporter DauA. (492 aa)    
Predicted Functional Partners:
cynT_2
Carbonic anhydrase 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 0.978
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.833
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.761
T45_02745
Hypothetical protein.
       0.758
cynT_1
Carbonic anhydrase 1.
 
 
0.686
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
 
 0.684
T45_05604
Hypothetical protein.
   
   0.683
cpt
Carboxypeptidase T precursor.
    
   0.671
petB
Cytochrome b6.
    
 
 0.657
T45_02744
AFG1-like ATPase.
       0.656
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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