Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_02752Polysaccharide deacetylase. (292 aa)    
Predicted Functional Partners:
T45_02753
Hypothetical protein.
       0.847
xynD_4
Bifunctional xylanase/deacetylase precursor.
  
     0.770
pdaC
peptidoglycan-N-acetylmuramic acid deacetylase PdaC precursor.
  
     0.767
T45_02751
Polyphosphate kinase 2 (PPK2.
       0.747
pdaA
peptidoglycan-N-acetylmuramic acid deacetylase PdaA precursor.
  
     0.741
pgdA_3
peptidoglycan-N-acetylglucosamine deacetylase.
  
     0.645
puuB_1
Gamma-glutamylputrescine oxidoreductase.
 
     0.575
T45_02744
AFG1-like ATPase.
       0.573
dauA_1
C4-dicarboxylic acid transporter DauA.
       0.539
T45_02756
peptidyl-tRNA hydrolase.
       0.519
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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