STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02756peptidyl-tRNA hydrolase. (246 aa)    
Predicted Functional Partners:
znuC_2
Zinc import ATP-binding protein ZnuC.
 
     0.831
T45_02754
Hypothetical protein.
       0.787
T45_01116
Hypothetical protein.
    
  0.778
fkbP_1
FK506-binding protein.
   
  0.731
fkbP_2
FK506-binding protein.
   
  0.731
T45_02759
Hypothetical protein.
       0.652
T45_04114
Uridine kinase.
  
 
   0.647
T45_02761
Hypothetical protein.
       0.607
T45_02757
Hypothetical protein.
       0.585
T45_02752
Polysaccharide deacetylase.
       0.550
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.