STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccpA_5Catabolite control protein A. (345 aa)    
Predicted Functional Partners:
csxA_1
exo-beta-D-glucosaminidase precursor.
 
     0.889
araQ_8
L-arabinose transport system permease protein.
       0.751
lacF_8
Lactose transport system permease protein LacF.
       0.751
msmE_5
Multiple sugar-binding protein precursor.
       0.751
paaJ_1
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.708
fadJ_1
Fatty acid oxidation complex subunit alpha.
       0.708
gltB_1
Glutamate synthase [NADPH] large chain.
    
 
 0.703
T45_06621
Bacterial extracellular solute-binding protein.
 
     0.603
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 
 0.600
lgrD_2
Linear gramicidin synthase subunit D.
    
   0.597
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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