Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
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Co-expression
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[Homology]
Score
tcrY_2Putative sensor histidine kinase TcrY. (501 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
   
 0.979
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.944
tcrX_3
Putative transcriptional regulatory protein.
 
  0.887
tcrX_2
Putative transcriptional regulatory protein.
 
  0.860
tcrX_7
Putative transcriptional regulatory protein.
 
  0.857
tcrX_4
Putative transcriptional regulatory protein.
 
  0.831
walR
Transcriptional regulatory protein WalR.
 
  0.829
tcrX_5
Putative transcriptional regulatory protein.
 
  0.821
phoP_1
Alkaline phosphatase synthesis transcriptional.
 
  0.817
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 0.817
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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