Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mcbR_2HTH-type transcriptional regulator McbR. (223 aa)    
Predicted Functional Partners:
T45_02826
Proline racemase; Belongs to the proline racemase family.
 
   
 0.873
hcnC_1
Hydrogen cyanide synthase subunit HcnC precursor.
  
 0.856
lutR_10
HTH-type transcriptional regulator LutR.
  
    0.749
dapA_1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
     0.748
lutR_1
HTH-type transcriptional regulator LutR.
  
    0.711
lldR_2
Putative L-lactate dehydrogenase operon regulatory protein.
  
    0.707
lutR_4
HTH-type transcriptional regulator LutR.
  
    0.691
hcnB
Hydrogen cyanide synthase subunit HcnB.
 
    0.684
hcnA
Hydrogen cyanide synthase subunit HcnA.
 
     0.683
lldR_4
Putative L-lactate dehydrogenase operon regulatory protein.
  
    0.676
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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