Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yabJ_2Enamine/imine deaminase. (132 aa)    
Predicted Functional Partners:
acrC_2
acryloyl-CoA reductase (NADH.
 
 
   0.898
bclA
benzoate--CoA ligase.
 
 
  0.882
namA
NADPH dehydrogenase.
 
    0.809
paaX_1
Transcriptional repressor PaaX.
 
     0.787
vioD
Putative tryptophan hydroxylase VioD.
 
    0.768
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  0.735
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.617
trpE_1
Anthranilate synthase component 1.
    
  0.609
trpE_2
Anthranilate synthase component 1.
    
  0.609
trpE_3
Anthranilate synthase component 1.
    
  0.609
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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