Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaX_1Transcriptional repressor PaaX. (271 aa)    
Predicted Functional Partners:
bclA
benzoate--CoA ligase.
 
     0.800
yabJ_2
Enamine/imine deaminase.
 
     0.787
acrC_2
acryloyl-CoA reductase (NADH.
       0.692
namA
NADPH dehydrogenase.
 
     0.666
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
   
 0.577
paaA
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
   
 0.556
sat/cysC_2
Putative bifunctional SAT/APS kinase; Catalyzes the synthesis of activated sulfate.
       0.547
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
 
   
 0.499
cobB_2
NAD-dependent protein deacetylase.
   
    0.495
T45_08956
Hypothetical protein.
   
    0.495
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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