Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
namANADPH dehydrogenase. (778 aa)    
Predicted Functional Partners:
bclA
benzoate--CoA ligase.
 
 
 0.950
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
 
  
 0.862
pobB
Phenoxybenzoate dioxygenase subunit beta.
 
  
 0.858
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
 
  
 0.857
paaG_3
1,2-epoxyphenylacetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.854
T45_01462
P-hydroxybenzoic acid--AMP ligase FadD22.
 
 
 0.842
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.841
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
    
 0.837
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
    
 0.837
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
  
 
 0.816
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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