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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase. (408 aa)    
Predicted Functional Partners:
argF_1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.999
arcB
Ornithine carbamoyltransferase, catabolic.
 
 
 0.997
arcC1
Carbamate kinase 1; Belongs to the carbamate kinase family.
 
  
 0.991
argF_2
Ornithine carbamoyltransferase.
 
 
 0.986
adiA
Biodegradative arginine decarboxylase.
    
 0.918
argH
Argininosuccinate lyase.
     
 0.917
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.916
strB1
Inosamine-phosphate amidinotransferase 1.
    
 0.913
T45_00227
Acetylornithine deacetylase.
  
 
 0.846
dapE_1
Succinyl-diaminopimelate desuccinylase.
  
 
 0.846
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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