Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mdtH_1Multidrug resistance protein MdtH. (415 aa)    
Predicted Functional Partners:
sbnA_2
Putative siderophore biosynthesis protein SbnA.
 
  
 0.989
T45_02900
Hypothetical protein.
 
     0.943
bacD_1
Alanine-anticapsin ligase BacD.
 
     0.937
desVI
dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose.
 
     0.920
T45_02898
L-Ala-D/L-Glu epimerase.
 
     0.892
dppA_2
Periplasmic dipeptide transport protein.
 
     0.822
copA_3
Copper resistance protein A precursor.
 
  
 0.817
sbnA_1
Putative siderophore biosynthesis protein SbnA.
  
  
 0.773
sbnA_3
Putative siderophore biosynthesis protein SbnA.
  
  
 0.773
copA_2
Copper resistance protein A precursor.
  
  
 0.772
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.