Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sbnA_2Putative siderophore biosynthesis protein SbnA. (361 aa)    
Predicted Functional Partners:
mdtH_1
Multidrug resistance protein MdtH.
 
  
 0.989
T45_02900
Hypothetical protein.
 
     0.931
bacD_1
Alanine-anticapsin ligase BacD.
 
  0.930
T45_02898
L-Ala-D/L-Glu epimerase.
 
     0.890
metB_1
Cystathionine gamma-synthase.
 
 0.867
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
    
 0.866
metB_2
Cystathionine gamma-synthase.
 
 0.859
cysK
Cysteine synthase.
     
  0.850
narB_2
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.834
desVI
dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose.
 
     0.825
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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