STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02935Hypothetical protein. (246 aa)    
Predicted Functional Partners:
hsaA_1
Flavin-dependent monooxygenase, oxygenase subunit.
 
     0.735
hsaB_2
Flavin-dependent monooxygenase, reductase subunit.
 
     0.703
hcaE_2
3-phenylpropionate/cinnamic acid dioxygenase.
  
     0.631
T45_05233
Bacterial regulatory proteins, tetR family.
  
     0.557
T45_00838
Amidohydrolase.
  
     0.529
T45_05252
Alpha/beta hydrolase family protein.
  
     0.491
lldD_2
L-lactate dehydrogenase [cytochrome].
       0.481
crnA_1
Creatinine amidohydrolase.
       0.481
mftF
N-glycosyltransferase.
       0.481
T45_05263
Amidohydrolase.
  
     0.476
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.