STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02954Hypothetical protein. (441 aa)    
Predicted Functional Partners:
maoC_5
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Belongs to the UPF0336 family.
 
 
0.997
lcfB_6
long-chain-fatty-acid--CoA ligase.
 
  
 0.892
pks2
Phthioceranic/hydroxyphthioceranic acid.
 
 0.886
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 0.886
caiD_2
carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.822
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.796
katA
Catalase.
   
 0.796
T45_05251
Lipid-transfer protein.
 
  0.793
T45_02152
Hypothetical protein.
 
   0.768
T45_05263
Amidohydrolase.
 
     0.760
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.