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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02985Hypothetical protein. (135 aa)    
Predicted Functional Partners:
hcaE_1
3-phenylpropionate/cinnamic acid dioxygenase.
  
 0.958
T45_00942
Hypothetical protein.
  
 0.958
kshA
3-ketosteroid-9-alpha-monooxygenase oxygenase.
  
 0.958
hcaE_2
3-phenylpropionate/cinnamic acid dioxygenase.
  
 0.958
tsaM1
Toluene-4-sulfonate monooxygenase system.
  
 0.958
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
  
 
 0.784
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.784
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
  
 
 0.784
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
 
 0.784
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
  
 
 0.784
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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