Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_06351 | cmdD_1 | T45_06351 | T45_02353 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Chondramide synthase cmdD. | 0.999 |
T45_06351 | dhbF_8 | T45_06351 | T45_05484 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Dimodular nonribosomal peptide synthase. | 0.999 |
T45_06351 | fabG_5 | T45_06351 | T45_02988 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.730 |
T45_06351 | fas6_1 | T45_06351 | T45_03755 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | LOG family protein ORF6 in fasciation locus. | 0.996 |
T45_06351 | gltB_1 | T45_06351 | T45_04042 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Glutamate synthase [NADPH] large chain. | 0.894 |
T45_06351 | lgrD_2 | T45_06351 | T45_05481 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Linear gramicidin synthase subunit D. | 0.999 |
T45_06351 | phaJ | T45_06351 | T45_00025 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | (R)-specific enoyl-CoA hydratase. | 0.553 |
T45_06351 | pksN | T45_06351 | T45_03157 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.978 |
T45_06351 | txtA | T45_06351 | T45_09185 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Thaxtomin synthase A. | 0.999 |
T45_06351 | txtB | T45_06351 | T45_09184 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Thaxtomin synthase B. | 0.999 |
cmdD_1 | T45_06351 | T45_02353 | T45_06351 | Chondramide synthase cmdD. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.999 |
cmdD_1 | dhbF_8 | T45_02353 | T45_05484 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.999 |
cmdD_1 | fabG_5 | T45_02353 | T45_02988 | Chondramide synthase cmdD. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.873 |
cmdD_1 | fas6_1 | T45_02353 | T45_03755 | Chondramide synthase cmdD. | LOG family protein ORF6 in fasciation locus. | 0.999 |
cmdD_1 | gltB_1 | T45_02353 | T45_04042 | Chondramide synthase cmdD. | Glutamate synthase [NADPH] large chain. | 0.744 |
cmdD_1 | lgrD_2 | T45_02353 | T45_05481 | Chondramide synthase cmdD. | Linear gramicidin synthase subunit D. | 0.999 |
cmdD_1 | pksN | T45_02353 | T45_03157 | Chondramide synthase cmdD. | Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.998 |
cmdD_1 | txtA | T45_02353 | T45_09185 | Chondramide synthase cmdD. | Thaxtomin synthase A. | 0.999 |
cmdD_1 | txtB | T45_02353 | T45_09184 | Chondramide synthase cmdD. | Thaxtomin synthase B. | 0.999 |
dhbF_8 | T45_06351 | T45_05484 | T45_06351 | Dimodular nonribosomal peptide synthase. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.999 |
page 1 of 6