STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03028SchA/CurD like domain protein. (374 aa)    
Predicted Functional Partners:
tcmI_1
Tetracenomycin polyketide synthesis protein.
    
 0.844
T45_03029
Hypothetical protein.
  
    0.789
T45_03032
Actinorhodin polyketide synthase acyl carrier.
       0.763
T45_03033
Putative polyketide cyclase.
  
    0.763
tcmI_2
Tetracenomycin polyketide synthesis protein.
    
 0.727
T45_03037
Sortase family protein.
  
  
 0.712
tfdB_1
2,4-dichlorophenol 6-monooxygenase.
     
 0.711
T45_03030
Actinorhodin polyketide putative beta-ketoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.675
T45_03031
Actinorhodin polyketide putative beta-ketoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
  0.632
tfdB_2
2,4-dichlorophenol 6-monooxygenase.
     
 0.490
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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