STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03030Actinorhodin polyketide putative beta-ketoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (422 aa)    
Predicted Functional Partners:
T45_03031
Actinorhodin polyketide putative beta-ketoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 
0.999
T45_06434
Actinorhodin polyketide putative beta-ketoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 
0.999
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
0.997
accA
Acetyl-coenzyme A carboxylase carboxyl.
 
 
 0.996
fabF_5
3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
   0.988
ppsE_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
 
0.980
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 0.979
pksN
Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
0.976
dhbF_8
Dimodular nonribosomal peptide synthase.
 
 0.976
fas6_1
LOG family protein ORF6 in fasciation locus.
 0.966
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.