Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcmN_1Multifunctional cyclase-dehydratase-3-O-methyl transferase. (353 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 0.851
T45_03036
Hypothetical protein.
     
 0.806
cmdD_1
Chondramide synthase cmdD.
    
 0.805
txtB
Thaxtomin synthase B.
    
 0.786
txtA
Thaxtomin synthase A.
    
 0.786
pcpB_1
Pentachlorophenol 4-monooxygenase.
  
  
  0.762
pcpB_2
Pentachlorophenol 4-monooxygenase.
  
  
  0.760
mhpA_1
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
     
  0.726
ppsA
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
 
  
 0.688
lgrD_2
Linear gramicidin synthase subunit D.
    
 0.612
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.