STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03052Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (153 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
    
 0.920
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.884
T45_01411
Sensory histidine kinase AtoS.
 
  
 0.804
T45_03050
Hypothetical protein.
       0.754
T45_09072
Sensory histidine kinase AtoS.
 
  
 0.745
T45_07508
Hypothetical protein.
  
     0.690
T45_01300
Hypothetical protein.
 
     0.661
T45_00244
Hypothetical protein.
  
     0.645
mreD
Hypothetical protein.
  
     0.644
T45_03141
Restriction endonuclease.
  
     0.638
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.