Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_03089Hypothetical protein. (216 aa)    
Predicted Functional Partners:
upp_1
Uracil phosphoribosyltransferase.
  
 0.868
upp_2
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 0.868
bsr
blasticidin-S deaminase.
    
 0.778
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.727
rihA
Pyrimidine-specific ribonucleoside hydrolase rihA.
   
 0.726
cmk
Cytidylate kinase.
   
 
 0.701
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
 
 0.698
gap2_1
Glyceraldehyde-3-phosphate dehydrogenase 2; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.684
T45_03423
Phosphatidylinositol 3- and 4-kinase.
    
  0.684
gap2_2
Glyceraldehyde-3-phosphate dehydrogenase 2.
  
 
 0.684
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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