Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
T45_03095Hypothetical protein. (64 aa)    
Predicted Functional Partners:
bchI
Magnesium-chelatase 38 kDa subunit.
  
 0.863
qorA_1
Quinone oxidoreductase 1.
       0.729
cobN
Aerobic cobaltochelatase subunit CobN.
  
 0.618
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
     
  0.613
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
   
 
  0.609
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
   
 
  0.609
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
   
 
  0.609
pobB
Phenoxybenzoate dioxygenase subunit beta.
   
 
  0.609
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
   
 
  0.609
acdA_6
acyl-CoA dehydrogenase.
       0.569
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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