Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03097Hypothetical protein. (119 aa)    
Predicted Functional Partners:
thcA
EPTC-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
    0.804
acoR_2
Acetoin dehydrogenase operon transcriptional.
 
     0.793
accA
Acetyl-coenzyme A carboxylase carboxyl.
     
  0.778
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.778
T45_03096
Hypothetical protein.
       0.685
acoA
Acetoin:2,6-dichlorophenolindophenol.
     
  0.546
acoR_1
Acetoin dehydrogenase operon transcriptional.
 
     0.505
galT
Galactose-1-phosphate uridylyltransferase.
     
  0.500
T45_03098
Hypothetical protein.
       0.490
aceB
Malate synthase; Belongs to the malate synthase family.
    
  0.475
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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