STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03098Hypothetical protein. (683 aa)    
Predicted Functional Partners:
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.747
beta-galIII
Beta-galactosidase III.
  
  0.617
T45_02202
Hypothetical protein.
  
     0.578
T45_02201
Hypothetical protein.
  
     0.555
T45_04829
Putative lipid kinase.
    
  0.552
xynD_1
Arabinoxylan arabinofuranohydrolase precursor.
 
 
  0.524
T45_02203
Hypothetical protein.
  
 
   0.517
T45_03097
Hypothetical protein.
       0.490
araN_4
Putative arabinose-binding protein precursor.
 
     0.487
iolB
5-deoxy-glucuronate isomerase.
   
    0.449
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.