Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_03110Extracellular; Belongs to the glycosyl hydrolase 43 family. (499 aa)    
Predicted Functional Partners:
hypBA2
beta-L-arabinobiosidase precursor.
 
   
 0.818
hypBA1_2
Non-reducing end beta-L-arabinofuranosidase.
 
     0.758
T45_01054
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.753
xynD_2
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.743
rhgT_1
Rhamnogalacturonan acetylesterase RhgT.
 
     0.737
hypBA1_3
Non-reducing end beta-L-arabinofuranosidase.
 
     0.728
rhgT_2
Rhamnogalacturonan acetylesterase RhgT.
  
     0.682
T45_06518
Hypothetical protein.
 
  
  0.678
xynB_5
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.675
T45_04497
alpha-L-arabinofuranosidase B (ABFB.
  
     0.641
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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