Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
znuB_2High-affinity zinc uptake system membrane protein ZnuB. (293 aa)    
Predicted Functional Partners:
znuC_3
Zinc import ATP-binding protein ZnuC.
 
 0.999
mtsA
Metal ABC transporter substrate-binding.
 
 
 0.995
znuC_1
High-affinity zinc uptake system ATP-binding protein.
  
 0.978
znuA
High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.934
T45_00528
Hypothetical protein.
  
 
 0.788
ideR
Iron-dependent repressor IdeR.
  
 
 0.672
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
    
 0.666
T45_03131
Pyridoxamine 5'-phosphate oxidase.
       0.503
zur
Zinc uptake regulation protein; Belongs to the Fur family.
  
  
 0.493
opuAB_2
Glycine betaine transport system permease.
    
 0.481
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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