Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03140Hypothetical protein. (151 aa)    
Predicted Functional Partners:
yegE
Putative diguanylate cyclase YegE.
 
 
 0.661
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
 
 
 0.656
rsbV_2
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.635
rsbU_14
Phosphoserine phosphatase RsbU.
  
   0.608
rsbU_9
Phosphoserine phosphatase RsbU.
 
 
 0.593
rsbV_5
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.580
rsbV_6
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.575
rsbV_4
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.574
rsbV_8
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.571
rsbV_3
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.568
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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