Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03145Translocation protein TolB. (357 aa)    
Predicted Functional Partners:
T45_03146
Translocation protein TolB.
 
    
0.848
T45_08903
Hypothetical protein.
 
   0.785
gltB_1
Glutamate synthase [NADPH] large chain.
     
  0.746
pezT
Toxin PezT.
 
   0.719
T45_01662
Hypothetical protein.
  
 0.700
arfA
Peptidoglycan-binding protein ArfA.
  
 0.700
T45_01208
Hypothetical protein.
  
     0.672
T45_01222
Hypothetical protein.
  
     0.624
T45_02278
Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family.
  
     0.623
T45_02041
Hypothetical protein.
  
     0.618
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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