STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcdAtRNA threonylcarbamoyladenosine dehydratase. (663 aa)    
Predicted Functional Partners:
thiS
Sulfur carrier protein ThiS.
  
 0.973
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.935
moaE1
Molybdopterin synthase catalytic subunit 1.
 
 0.899
T45_08207
Hypothetical protein.
  
 
 0.864
iscS_1
Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family.
   
 0.831
iscS_2
Cysteine desulfurase.
   
 0.831
lon2
Lon protease 2.
    
 0.827
galD
4-oxalomesaconate tautomerase.
     
 0.816
cysO_1
Sulfur carrier protein CysO.
  
 0.811
T45_06005
ThiS family protein.
  
 0.811
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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