Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdh_2D-threo-aldose 1-dehydrogenase. (342 aa)    
Predicted Functional Partners:
T45_05043
Amidohydrolase.
  
  0.938
T45_08466
Amidohydrolase.
  
  0.933
lutR_4
HTH-type transcriptional regulator LutR.
 
     0.849
kdgK_4
2-dehydro-3-deoxygluconokinase.
    
  0.696
T45_03167
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.673
fucU
L-fucose mutarotase; Belongs to the RbsD / FucU family.
 
     0.643
ywqF
UDP-glucose 6-dehydrogenase YwqF.
   
 
  0.624
kduD_2
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
 
     0.617
kdgK_5
2-dehydro-3-deoxygluconokinase.
     
  0.617
kdgK_8
2-dehydro-3-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
     
  0.617
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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