Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_03167L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (444 aa)    
Predicted Functional Partners:
T45_05043
Amidohydrolase.
 
  
 0.927
T45_08466
Amidohydrolase.
 
  
 0.925
fdh_2
D-threo-aldose 1-dehydrogenase.
 
     0.673
fucU
L-fucose mutarotase; Belongs to the RbsD / FucU family.
 
     0.604
xecE
2-(S-hydroxypropyl-CoM dehydrogenase.
 
     0.582
T45_01986
Macro domain protein.
   
   0.559
ymdB
O-acetyl-ADP-ribose deacetylase.
   
   0.559
fdh_3
D-threo-aldose 1-dehydrogenase.
 
     0.559
fdh_1
D-threo-aldose 1-dehydrogenase.
 
     0.549
rspA
Starvation-sensing protein RspA; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.540
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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