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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03201Hypothetical protein. (779 aa)    
Predicted Functional Partners:
T45_00287
Stage II sporulation protein E (SpoIIE).
  
     0.545
lmrA
Multidrug resistance ABC transporter ATP-binding and permease protein.
 
     0.501
T45_05574
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.457
T45_05572
Hypothetical protein.
  
     0.455
T45_09129
Hypothetical protein.
  
     0.449
T45_07785
Hypothetical protein.
  
     0.427
T45_04864
Hypothetical protein.
  
     0.419
T45_01602
Hypothetical protein.
  
     0.417
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.