Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03210Hypothetical protein. (207 aa)    
Predicted Functional Partners:
epsL
Putative sugar transferase EpsL.
  
 
 0.955
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.955
ylxH
Flagellum site-determining protein YlxH; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.818
T45_01126
Hypothetical protein.
  
 
 0.616
tagH_1
Teichoic acids export ATP-binding protein TagH.
  
  
 0.606
tagH_2
Teichoic acids export ATP-binding protein TagH.
  
  
 0.606
drrB_1
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
  
  
 0.532
tagG_1
Teichoic acid translocation permease protein.
  
  
 0.532
tagG_2
Teichoic acid translocation permease protein.
  
  
 0.532
wbpI
UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
 0.496
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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