STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03217Zinc-type alcohol dehydrogenase-like protein. (312 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.951
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
 0.892
ppsE_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
  
 0.832
fruA
PTS system fructose-specific EIIABC component.
     
 0.781
fas6_1
LOG family protein ORF6 in fasciation locus.
  
 0.759
T45_01642
Hypothetical protein.
     
  0.746
T45_06353
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
   
 0.744
T45_03218
Putative oxidoreductase.
 
     0.739
ppsC_5
Phthiocerol synthesis polyketide synthase type I.
  
     0.731
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
 0.671
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.