Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_03221Hypothetical protein. (346 aa)    
Predicted Functional Partners:
T45_03220
Hypothetical protein.
       0.723
T45_06592
NAD(P)H-dependent FAD/FMN reductase.
  0.679
T45_03219
Hypothetical protein.
       0.604
limB_1
Limonene 1,2-monooxygenase.
  
     0.578
ssuE
FMN reductase (NADPH).
 
  0.568
narB_2
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
  0.541
pyrR
Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
 
  
  0.471
T45_03223
SnoaL-like domain protein.
    
  0.448
ssuD_2
Alkanesulfonate monooxygenase.
  
     0.447
T45_03218
Putative oxidoreductase.
       0.426
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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