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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03264Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A. (536 aa)    
Predicted Functional Partners:
dctA_2
Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.748
T45_03262
Putative ABC transporter ATP-binding protein.
       0.604
yheI_1
Putative multidrug resistance ABC transporter.
       0.594
T45_00428
Hypothetical protein.
       0.550
plaP_2
Low-affinity putrescine importer PlaP.
  
     0.494
steT_3
Serine/threonine exchanger SteT.
  
     0.493
steT_1
Serine/threonine exchanger SteT.
  
     0.470
T45_04914
Hypothetical protein.
  
     0.453
T45_03261
Hypothetical protein.
       0.435
abfB_2
Extracellular exo-alpha-L-arabinofuranosidase precursor; Belongs to the glycosyl hydrolase 43 family.
  
     0.431
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.