Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
T45_03300Pyridoxamine 5'-phosphate oxidase. (195 aa)    
Predicted Functional Partners:
T45_03301
Hypothetical protein.
       0.873
T45_03299
Hypothetical protein.
       0.733
T45_03303
Na(+)-translocating NADH-quinone reductase.
       0.714
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
     0.700
apbE_1
Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.681
T45_03295
Bacterial regulatory proteins, tetR family.
 
     0.668
argH
Argininosuccinate lyase.
       0.623
yhdN_3
General stress protein 69.
       0.592
T45_04651
Hypothetical protein.
       0.519
T45_03611
Hypothetical protein.
       0.516
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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