STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadB2_23-hydroxybutyryl-CoA dehydrogenase. (322 aa)    
Predicted Functional Partners:
echA8_7
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.994
T45_02053
Putative acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.977
thlA_1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.977
echA8_2
Putative enoyl-CoA hydratase echA8.
 0.975
fadA_1
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.974
T45_05211
acetyl-CoA acetyltransferase.
  
 0.964
echA8_8
Putative enoyl-CoA hydratase echA8.
 
 0.955
caiD_2
carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.948
caiD_4
carnitinyl-CoA dehydratase.
 
 0.945
paaF_2
2,3-dehydroadipyl-CoA hydratase.
 0.934
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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