STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03340Thermophilic serine proteinase precursor. (401 aa)    
Predicted Functional Partners:
T45_03341
Hypothetical protein.
       0.884
cpt
Carboxypeptidase T precursor.
  
 0.704
lieA_2
Leupeptin-inactivating enzyme 1 precursor.
 
  
 0.669
T45_06617
Hypothetical protein.
   
 0.665
sdrE
Serine-aspartate repeat-containing protein E.
    
  0.646
bprV
Extracellular basic protease precursor.
  
  
0.620
T45_02014
Trypsin.
  
 0.610
T45_04677
Trypsin.
 
  
 0.605
T45_05415
Trypsin.
 
  
 0.602
T45_00801
FtsK/SpoIIIE family protein.
  
 
 0.582
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.