STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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yhdG_2Putative amino acid permease YhdG. (510 aa)    
Predicted Functional Partners:
nadE
Glutamine-dependent NAD(+)synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.543
T45_06697
Cytosine permease; Belongs to the purine-cytosine permease (2.A.39) family.
  
    0.531
T45_06535
Hypothetical protein.
  
 
  0.507
T45_03365
Hypothetical protein.
 
     0.506
T45_03643
Hypothetical protein.
  
 
  0.503
amy
Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family.
   
  0.494
malL_1
Oligo-1,6-glucosidase.
    
  0.492
treS
Trehalose synthase/amylase TreS.
    
  0.492
T45_04098
Acetyltransferase (GNAT) family protein.
    
  0.492
malL_2
Oligo-1,6-glucosidase.
    
  0.492
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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