Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_04098 | amy | T45_04098 | T45_08771 | Acetyltransferase (GNAT) family protein. | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.410 |
T45_04098 | yhdG_2 | T45_04098 | T45_03356 | Acetyltransferase (GNAT) family protein. | Putative amino acid permease YhdG. | 0.792 |
T45_05551 | aml | T45_05551 | T45_08770 | Hypothetical protein. | Alpha-amylase precursor. | 0.620 |
T45_05551 | amy | T45_05551 | T45_08771 | Hypothetical protein. | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.754 |
T45_05551 | treS | T45_05551 | T45_02108 | Hypothetical protein. | Trehalose synthase/amylase TreS. | 0.778 |
T45_05551 | yhdG_2 | T45_05551 | T45_03356 | Hypothetical protein. | Putative amino acid permease YhdG. | 0.792 |
T45_07079 | aml | T45_07079 | T45_08770 | Beta/alpha-amylase precursor. | Alpha-amylase precursor. | 0.730 |
T45_07079 | amy | T45_07079 | T45_08771 | Beta/alpha-amylase precursor. | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.545 |
T45_07079 | malL_2 | T45_07079 | T45_04760 | Beta/alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.522 |
T45_07079 | yhdG_2 | T45_07079 | T45_03356 | Beta/alpha-amylase precursor. | Putative amino acid permease YhdG. | 0.792 |
aml | T45_05551 | T45_08770 | T45_05551 | Alpha-amylase precursor. | Hypothetical protein. | 0.620 |
aml | T45_07079 | T45_08770 | T45_07079 | Alpha-amylase precursor. | Beta/alpha-amylase precursor. | 0.730 |
aml | amy | T45_08770 | T45_08771 | Alpha-amylase precursor. | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.962 |
aml | malL_1 | T45_08770 | T45_01154 | Alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.730 |
aml | malL_2 | T45_08770 | T45_04760 | Alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.720 |
aml | malL_3 | T45_08770 | T45_06545 | Alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.740 |
aml | treS | T45_08770 | T45_02108 | Alpha-amylase precursor. | Trehalose synthase/amylase TreS. | 0.861 |
aml | yhdG_2 | T45_08770 | T45_03356 | Alpha-amylase precursor. | Putative amino acid permease YhdG. | 0.792 |
amy | T45_04098 | T45_08771 | T45_04098 | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | Acetyltransferase (GNAT) family protein. | 0.410 |
amy | T45_05551 | T45_08771 | T45_05551 | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | Hypothetical protein. | 0.754 |
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