STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accA1_1Acetyl-/propionyl-coenzyme A carboxylase alpha chain. (1171 aa)    
Predicted Functional Partners:
atzF
Allophanate hydrolase.
  
 0.999
kipI
Kinase A inhibitor.
  
 0.999
accA
Acetyl-coenzyme A carboxylase carboxyl.
 
 0.996
pxpA
lamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 
 0.996
kipA
KipI antagonist.
  
 0.993
T45_03365
Hypothetical protein.
 
   
 0.975
T45_03366
Hypothetical protein.
 
   
 0.975
T45_08140
Hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.968
T45_01570
Hypothetical protein.
   
 0.967
T45_05844
Hypothetical protein.
   
 0.967
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.