STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gylRGlycerol operon regulatory protein. (254 aa)    
Predicted Functional Partners:
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
  0.862
kipI
Kinase A inhibitor.
  
    0.837
kipR_5
HTH-type transcriptional regulator KipR.
  
     0.773
rhmR_1
Putative HTH-type transcriptional regulator.
  
     0.768
iclR_2
Acetate operon repressor.
  
     0.764
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.708
kipR_2
HTH-type transcriptional regulator KipR.
  
     0.697
pobR_2
P-hydroxybenzoate hydroxylase transcriptional activator.
  
     0.688
glpD_1
Aerobic glycerol-3-phosphate dehydrogenase.
       0.673
pobR_1
P-hydroxybenzoate hydroxylase transcriptional activator.
  
     0.663
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.