Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
udpUridine phosphorylase. (260 aa)    
Predicted Functional Partners:
pdp
Pyrimidine-nucleoside phosphorylase.
  
 
 0.950
cdd
Cytidine deaminase.
  
 
 0.948
tdk
Thymidine kinase.
  
  
 0.926
bsr
blasticidin-S deaminase.
  
 
 0.922
atzA
Atrazine chlorohydrolase.
    
 0.913
T45_01553
Uridine/cytidine kinase.
    
 0.872
upp_2
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
     
 0.865
tmpC_2
Membrane lipoprotein TmpC precursor.
 
     0.859
pyrR
Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
 0.858
yhcR
Endonuclease YhcR precursor; Belongs to the 5'-nucleotidase family.
    
  0.853
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.