STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03463Hypothetical protein. (195 aa)    
Predicted Functional Partners:
T45_03462
Hypothetical protein.
       0.821
T45_03460
Phage late control gene D protein (GPD).
       0.817
T45_03461
Hypothetical protein.
       0.817
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.777
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
    
  0.741
T45_03459
Phage-related baseplate assembly protein.
       0.740
T45_03464
Hypothetical protein.
       0.669
T45_03465
Hypothetical protein.
       0.664
korA
2-oxoglutarate oxidoreductase subunit KorA.
   
 
  0.642
ftsH_2
ATP-dependent zinc metalloprotease FtsH.
  
    0.633
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.