STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdnIFormate dehydrogenase, nitrate-inducible. (221 aa)    
Predicted Functional Partners:
fdnH
Formate dehydrogenase, nitrate-inducible.
  
 0.998
yedY_2
Sulfoxide reductase catalytic subunit YedY.
 
  
  0.964
fdoG
Formate dehydrogenase-O major subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.959
nasC
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.923
narB_1
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.923
T45_08879
Putative formate dehydrogenase.
  
 
 0.923
fdhF_1
Formate dehydrogenase H.
  
 0.911
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
 0.894
pflB
Formate acetyltransferase.
     
 0.892
maeA
NAD-dependent malic enzyme.
   
 
  0.892
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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