STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03487Hypothetical protein. (100 aa)    
Predicted Functional Partners:
znuC_1
High-affinity zinc uptake system ATP-binding protein.
  
 0.982
znuC_3
Zinc import ATP-binding protein ZnuC.
  
 0.982
znuA
High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.903
mtsA
Metal ABC transporter substrate-binding.
  
 
 0.903
T45_00528
Hypothetical protein.
  
 
 0.794
T45_03486
Zinc-type alcohol dehydrogenase-like protein.
       0.769
T45_03488
Phosphotransferase enzyme family protein.
       0.745
mntH
Divalent metal cation transporter MntH.
  
  
 0.663
ideR
Iron-dependent repressor IdeR.
  
 
 0.657
yfcD_1
Putative Nudix hydrolase YfcD.
       0.550
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.