STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actIII_1Putative ketoacyl reductase. (253 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.918
kstR2_5
HTH-type transcriptional repressor KstR2.
       0.881
gltB_1
Glutamate synthase [NADPH] large chain.
    
  0.805
lcfB_8
long-chain-fatty-acid--CoA ligase.
       0.792
pks2
Phthioceranic/hydroxyphthioceranic acid.
   
 0.786
lgrD_2
Linear gramicidin synthase subunit D.
  
 
 0.761
T45_03493
Hypothetical protein.
       0.757
fabG_24
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
 
   0.754
fas6_1
LOG family protein ORF6 in fasciation locus.
   
 0.704
T45_03494
Hypothetical protein.
       0.701
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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